MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
19428wH3_P2318
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 233
bases: 5,137,552 bps
CDS: 4,380
rRNA: 8
Repeat region:
tmRNA: 1
tRNA: 70
misc RNA:
Total features: 4,459
Total number of protein coding genes annotated/found:
4,380
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5013|JADGKQ010000009.1
SEQF5013_04459
Genome Viewer
NA
AA
882/294
109467-108586
Bifunctional protein FolD protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04458
Genome Viewer
NA
AA
1155/385
108589-107435
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04456
Genome Viewer
NA
AA
1929/643
104969-106897
Holliday junction ATP-dependent DNA helicase RuvB
SEQF5013|JADGKQ010000009.1
SEQF5013_04455
Genome Viewer
NA
AA
297/99
104864-104568
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04454
Genome Viewer
NA
AA
342/114
104564-104223
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04453
Genome Viewer
NA
AA
594/198
103509-104102
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04452
Genome Viewer
NA
AA
234/78
103239-103472
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04451
Genome Viewer
NA
AA
1461/487
103105-101645
Cytosol non-specific dipeptidase
SEQF5013|JADGKQ010000009.1
SEQF5013_04450
Genome Viewer
NA
AA
1149/383
101664-100516
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04449
Genome Viewer
NA
AA
1818/606
98369-100186
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04448
Genome Viewer
NA
AA
3105/1035
95117-98221
Beta-galactosidase
SEQF5013|JADGKQ010000009.1
SEQF5013_04447
Genome Viewer
NA
AA
2325/775
92733-95057
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04446
Genome Viewer
NA
AA
1584/528
91133-92716
N-acetylglucosamine-6-O-sulfatase
SEQF5013|JADGKQ010000009.1
SEQF5013_04445
Genome Viewer
NA
AA
1782/594
89150-90931
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04444
Genome Viewer
NA
AA
1818/606
87287-89104
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04443
Genome Viewer
NA
AA
3360/1120
83914-87273
TonB-dependent receptor SusC
SEQF5013|JADGKQ010000009.1
SEQF5013_04442
Genome Viewer
NA
AA
1665/555
82219-83883
hypothetical protein
SEQF5013|JADGKQ010000009.1
SEQF5013_04441
Genome Viewer
NA
AA
753/251
81204-81956
N-acetylmuramate alpha-1-phosphate uridylyltransferase
SEQF5013|JADGKQ010000009.1
SEQF5013_04440
Genome Viewer
NA
AA
1491/497
79714-81204
RNase adapter protein RapZ
SEQF5013|JADGKQ010000009.1
SEQF5013_04439
Genome Viewer
NA
AA
3906/1302
79600-75695
Sensor histidine kinase RcsC
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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